Rapid detection of Vibrio alginolyticus in seafood using the flgL gene and real-time polymerase chain reaction
Abstract
Background: Seafood is highly nutritious but poses health risks when contaminated with pathogenic bacteria like Vibrio alginolyticus, which causes food poisoning and can infect marine animals and humans.
Objective: This research aimed to determine the sensitivity and specificity of real-time polymerase chain reaction (rt-PCR) using the flgL primer pair to detect V. alginolyticus bacteria in seafood.
Methods: The rt-PCR method was used to detect V. alginolyticus quickly, specifically, and sensitively. The flgL primer pair was evaluated for amplicon length, Ct value, Tm value, and its ability to differentiate between target and non-target bacteria. In this research, the samples tested were red snapper and blood clams.
Results: The flgL primer produced an amplicon length of 224 bp. At 50 ng concentration, it yielded a Ct value of approximately 11.00 and a Tm of approximately 83°C. The flgL primer successfully differentiated between target and non-target bacteria. In sensitivity tests, it detected V. alginolyticus at concentrations as low as 1.86 x 10-3 ng/µL. Detection in seafood samples was also successful.
Conclusion: The rt-PCR assay using the flgL primer pair effectively detects Vibrio alginolyticus in seafood with high specificity, sensitivity, and rapidity. These findings support its use for rapid and accurate detection of pathogenic bacteria in seafood.
References
Fu K, Li J, Wang Y, Liu J, Yan H, Shi L, et al. An innovative method for rapid identification and detection of Vibrio alginolyticus in different infection models. Frontiers in Microbiology. 2016 May 6;7. https://doi.org/10.3389/fmicb.2016.00651
Siyam N, Cahyati WH. Peningkatan kapasitas penghuni pondok pesantren dalam pencegahan food borne disease dengan metode peer education. Visikes. 2018 Nov 16;17(02). https://doi.org/10.33633/visikes.v17i02.2118
Jones JL. VIBRIO | Introduction, including vibrio parahaemolyticus, vibrio vulnificus, and other vibrio species. Encyclopedia of Food Microbiology. 2014;691-8. https://doi.org/10.1016/B978-0-12-384730-0.00345-1
Tari A, Kia Duan F, Amalo D. Analisis kandungan gizi jenis-jenis kerang yang biasa dikonsumsi masyarakat nembe Desa Oeseli Kecamatan Rote Barat Daya Kabupaten Rote Ndao NTT. Jurnal Biotropikal Sains. 2018 Jun;15(2):1-9.
Widyastuti DA. Deteksi molekuler mikroorganisme patogen pada bahan pangan dengan metode RT-PCR. Jurnal Ilmu Pangan dan Hasil Pertanian. 2017 Jun 17;1(1):54. https://doi.org/10.26877/jiphp.v1i1.1356
Nurjayadi M., Muslimah H, Auni PAN, Kurniadewi F, Sukmawati D, Saamia V, et al. Detection of food-borne pathogens bacteria Staphylococcus aureus in contaminated meat and milk product by real-time PCR. AIP conference proceedings. 2023 Jan 1; https://doi.org/10.1063/5.0143666
Wei S, Zhao H, Xian Y, Hussain MA, Wu X. Multiplex PCR assays for the detection of Vibrio alginolyticus, Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae with an internal amplification control. Diagnostic Microbiology and Infectious Disease. 2014 Jun;79(2):115-8. https://doi.org/10.1016/j.diagmicrobio.2014.03.012
Nassiri M, Elahi Torshizi M, Ghovvati S, Doosti M. Evaluation of different statistical methods using SAS software: an in silico approach for analysis of real-time PCR data. Journal of Applied Statistics. 2017 Jan 14;45(2):306-19. https://doi.org/10.1080/02664763.2016.1276890
Nurjayadi M, Pertiwi YP, Islami N, Azizah N, Efrianti UR, Saamia V, et al. Detection of the Salmonella typhi bacteria in contaminated egg using real-time PCR to develop rapid detection of food poisoning bacteria. Biocatalysis and Agricultural Biotechnology. 2019 Jul;20:101214. https://doi.org/10.1016/j.bcab.2019.101214
Rahayu WP, Nurjanah S, Komalasari E. Escherichia coli: Patogenitas, analisis dan kajian risiko. IPB Press; 2018.
Dorak M. Real-time PCR. Taylor & Francis; 2007. https://doi.org/10.4324/9780203967317
Nurjayadi M, Islami N, Pertiwi YP, V Saamia, Wirana IM. Evaluation of primer detection capabilities of fimC Salmonella typhi using real time PCR for rapid detection of bacteria causes of food poisoning. IOP conference series Materials science and engineering. 2018 Dec 3;434:012097-7. https://doi.org/10.1088/1757-899X/434/1/012097
Wijayanti LE, Aryani D, Wahyu S. Hubungan nilai CT pada pasien terkonfirmasi Covid-19 dengan hasil pemeriksaan d-dimer. Jurnal Kesehatan Tambusai. 2022 Mar 16;3(1):96-103. https://doi.org/10.31004/jkt.v3i1.3089
Schrader C, Schielke A, Ellerbroek L, Johne R. PCR inhibitors - occurrence, properties and removal. Journal of Applied Microbiology. 2012 Jul 24;113(5):1014-26. https://doi.org/10.1111/j.1365-2672.2012.05384.x
Jacoeb AM, Nurjanah, Saraswati A. Kandungan asam lemak dan kolesterol kakap merah (Lutjanus bohar) setelah pengukusan. Jurnal Pengolahan Hasil Perikanan Indonesia. 2014 Jun 19;16(2). https://doi.org/10.17844/jphpi.v16i2.8051

Copyright (c) 2024 Authors

This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.